Open Research
From printers and Python to pondlife and pathology: research into and using the OpenFlexure Microscope
<p>The OpenFlexure Microscope is an open source, laboratory-grade robotic microscope, used by a diverse community including academic researchers, engineers, educators, pathologists and hobbyists (https://openflexure.org/, https://openflexure.discourse.group/). Users from over 60 countries have developed and used the device for everything ranging from exploring their garden's wildlife, to training medical students to diagnose cancer. Joe presents his experience as an academic member of the OpenFlexure development team for the last eight years. While his work focuses on the medical applications of the Microscope, research is planned and prioritised to benefit all members of the community. Development of the OpenFlexure software has enabled smart microscopy on the OpenFlexure Microscope, with automated sample identification, smart path planning and image processing, bringing novel research techniques such as digital pathology into new environments which traditionally lack the infrastructure to support them (https://gitlab.com/openflexure/openflexure-microscope-server, https://gitlab.com/openflexure/openflexure-microscope). The research builds on FOSS software and libraries, including Arduino and OpenCV, and extends open science by improving access to essential hardware. This is reflected in the range of OpenFlexure publications from outside the core development team, including peer reviewed articles in the fields of engineering, machine learning, medicine and social science.</p>
Weitere Infos
| Live Stream | https://live.fosdem.org/watch/aw1120 |
|---|---|
| Format | devroom |
| Sprache | Englisch |
Weitere Sessions
| 01.02.26 |
<p>At the current rate of digitization, it is estimated that it would take hundreds of years to fully digitize the natural science collections of Europe. In the face of the biodiversity crisis, we urgently need to scale up digitization to equip researchers with the tools to tackle this challenge. </p> <p>The Distributed System of Scientific Collections, DiSSCo, is a fully open source European infrastructure that is bringing together over 300 institutions into a unified, digital natural science ...
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| 01.02.26 |
<p>The exponential growth of scientific literature—doubling roughly every nine years—has made it increasingly difficult for researchers and decision-makers to locate, assess, and synthesize the evidence needed for sound policy and practice. Systematic maps and systematic reviews offer robust, unbiased ways to answer “what works?” but today they depend on manual search and screening workflows that are slow, costly, and vulnerable to human error. The result is a bottleneck: high-quality, ...
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| 01.02.26 |
<p>AI has become an integral part of modern research, offering tremendous opportunities, but also raising important questions for the Open Science community.</p> <p>With the emergence of the Open Source AI Definition (OSAID) and its emphasis on the four freedoms, the “freedom to study” stands out as a cornerstone for achieving true reproducibility. You can read the OSAID definition here: https://opensource.org/ai/open-source-ai-definition.</p> <p>This talk will explore how researchers can ...
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| 01.02.26 |
<p>vLLM (https://github.com/vllm-project/vllm) has rapidly become a community-standard open-source engine for LLM inference, backed by a large and growing contributor base and widely adopted for production serving. This talk offers a practical blueprint for scaling inference in vLLM using two complementary techniques, quantization (https://github.com/vllm-project/llm-compressor) and speculative decoding (https://github.com/vllm-project/speculators). Drawing on extensive evaluations across ...
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| 01.02.26 |
<p>Quantum computing creates new opportunities, but building and operating a quantum cloud service remains a complex challenge, often relying on proprietary, black-box solutions. To bridge this gap, we introduce OQTOPUS (Open Quantum Toolchain for OPerators and USers) [1], a comprehensive open-source software stack designed to build and manage full-scale quantum computing systems. OQTOPUS provides a complete cloud architecture for quantum computers, covering three critical layers: 1.Frontend ...
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| 01.02.26 |
<p>NoiseModelling is an open-source platform for simulating environmental noise propagation and generating regulatory-compliant noise maps at urban and regional scales. Leaded since 2008 by the Joint Research Unit in Environmental Acoustics at Gustave Eiffel University, it provides researchers and practitioners with reproducible, transparent, and scalable modelling capabilities for environmental acoustics. As the modelling core of the Noise-Planet framework, NoiseModelling simulates noise ...
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| 01.02.26 |
<p>The Open Research Devroom Organizers' Panel is a 15 min slot where the organizing team of the devroom will do: - A roundtable presentation of the organizing team - An informal invitation to the audience to join the organizing team of the devroom next year - Open questions and answers regarding organization of the devroom</p>
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